A coarse-to-fine approach to prostate boundary segmentation in ultrasound images

BACKGROUND: In this paper a novel method for prostate segmentation in transrectal ultrasound images is presented. METHODS: A segmentation procedure consisting of four main stages is proposed. In the first stage, a locally adaptive contrast enhancement method is used to generate a well-contrasted image. In the second stage, this enhanced image is thresholded to extract an area containing the prostate (or large portions of it). Morphological operators are then applied to obtain a point inside of this area. Afterwards, a Kalman estimator is employed to distinguish the boundary from irrelevant parts (usually caused by shadow) and generate a coarsely segmented version of the prostate. In the third stage, dilation and erosion operators are applied to extract outer and inner boundaries from the coarsely estimated version. Consequently, fuzzy membership functions describing regional and gray-level information are employed to selectively enhance the contrast within the prostate region. In the last stage, the prostate boundary is extracted using strong edges obtained from selectively enhanced image and information from the vicinity of the coarse estimation. RESULTS: A total average similarity of 98.76%(± 0.68) with gold standards was achieved. CONCLUSION: The proposed approach represents a robust and accurate approach to prostate segmentation

On the Coupling Between the Incus and the Stapes in the Cat

The connection between the long process and the lenticular process of the incus is extremely fine, so much so that some authors have treated the lenticular process as a separate bone. We review descriptions of the lenticular process that have appeared in the literature, and present some new histological observations. We discuss the dimensions and composition of the lenticular process and of the incudostapedial joint, and present estimates of the material properties for the bone, cartilage, and ligament of which they are composed. We present a preliminary finite-element model which includes the lenticular plate, the bony pedicle connecting the lenticular plate to the long process, the head of the stapes, and the incudostapedial joint. The model has a much simplified geometry. We present simulation results for ranges of values for the material properties. We then present simulation results for this model when it is incorporated into an overall model of the middle ear of the cat. For the geometries and material properties used here, the bony pedicle is found to contribute significant flexibility to the coupling between the incus and the stapes

Tympanic Membrane Boundary Deformations Derived from Static Displacements Observed with Computerized Tomography in Human and Gerbil

The middle ear is too complex a system for its function to be fully understood with simple descriptive models. Realistic mathematical models must be used in which structural elements are represented by geometrically correct three-dimensional (3D) models with correct physical parameters and boundary conditions. In the past, the choice of boundary conditions could not be based on experimental evidence as no clear-cut data were available. We have, therefore, studied the deformation of the tympanic membrane (TM) at its boundaries using X-ray microscopic computed tomography in human and gerbil while static pressure was applied to the ear canal. The 3D models of the TM and its bony attachments were carefully made and used to measure the deformation of the TM with focus on the periphery and the manubrium attachment. For the pars flaccida of the gerbil, the boundary condition can, for the most part, be described as simply supported. For the human pars flaccida, the situation is more complicated: superiorly, the membrane contacts the underlying bone more and more when pushed further inward, and it gradually detaches from the wall when sucked outward. In gerbil, the attachment of the TM to the manubrium can be described as simply supported. In human, the manubrium is attached underneath the TM via the plica mallearis and the contact of the TM with the bone is indirect. For both human and gerbil, a simple boundary condition for the peripheral edge of the pars tensa is not appropriate due to the intricate structure at the edge: the TM thickens rapidly before continuing into the annulus fibrosis which finally makes contact with the bone

Level Set Contouring for Breast Tumor in Sonography

The echogenicity, echotexture, shape, and contour of a lesion are revealed to be effective sonographic features for physicians to identify a tumor as either benign or malignant. Automatic contouring for breast tumors in sonography may assist physicians without relevant experience, in making correct diagnoses. This study develops an efficient method for automatically detecting contours of breast tumors in sonography. First, a sophisticated preprocessing filter reduces the noise, but preserves the shape and contrast of the breast tumor. An adaptive initial contouring method is then performed to obtain an approximate circular contour of the tumor. Finally, the deformation-based level set segmentation automatically extracts the precise contours of breast tumors from ultrasound (US) images. The proposed contouring method evaluates US images from 118 patients with breast tumors. The contouring results, obtained with computer simulation, reveal that the proposed method always identifies similar contours to those obtained with manual sketching. The proposed method provides robust and fast automatic contouring for breast US images. The potential role of this approach might save much of the time required to sketch a precise contour with very high stability

Quasi-static Transfer Function of the Rabbit Middle Ear‚ Measured with a Heterodyne Interferometer with High-Resolution Position Decoder

Due to changes in ambient pressure and to the gas-exchange processes in the middle ear (ME) cavity, the ear is subject to ultra-low-frequency pressure variations, which are many orders of magnitude larger than the loudest acoustic pressures. Little quantitative data exist on how ME mechanics deals with these large quasi-static pressure changes and because of this lack of data, only few efforts could be made to incorporate quasi-static behavior into computer models. When designing and modeling ossicle prostheses and implantable ME hearing aids, the effects of large ossicle movements caused by quasi-static pressures should be taken into account. We investigated the response of the ME to slowly varying pressures by measuring the displacement of the umbo and the stapes in rabbit with a heterodyne interferometer with position decoder. Displacement versus pressure curves were obtained at linear pressure change rates between 200 Pa/s and 1.5 kPa/s, with amplitude ±2.5 kPa. The change in stapes position associated with a pressure change is independent of pressure change rate (34 μm peak-to-peak at ±2.5 kPa). The stapes displacement versus pressure curves are highly nonlinear and level off for pressures beyond ±1 kPa. Stapes motion shows no measurable hysteresis at 1.5 kPa/s, which demonstrates that the annular ligament has little viscoelasticity. Hysteresis increases strongly at the lowest pressure change rates. The stapes moves in phase with the umbo and with pressure, but the sense of rotation of the hysteresis loop of stapes is phase inversed. Stapes motion is not a simple lever ratio mimic of umbo motion, but is the consequence of complex changes in ossicle joints and ossicle position. The change in umbo position produced by a ±2.5 kPa pressure change decreases with increasing rate from 165 μm at 200 Pa/s to 118 μm at 1.5 kPa/s. Umbo motion already shows significant hysteresis at 1.5 kPa/s, but hysteresis increases further as pressure change rate decreases. We conclude that in the quasi-static regime, ossicle movement is not only governed by viscoelasticity, but that other effects become dominant as pressure change rate decreases below 1 kPa/s. The increasing hysteresis can be caused by increasing friction as speed of movement decreases, and incorporating speed-dependent friction coefficients will be essential to generate realistic models of ossicle movements at slow pressure change rates